SNP Profiles of GU 154 /C   View Data

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 Key

 1234567891011121314
_Input profile
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
1._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
2._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
3._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
4._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
5._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
6._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
7._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
8._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
9._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
10._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
11._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
12._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
13._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
14._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
15._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
16._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
17._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
18._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
19._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
20._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
21._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
22._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGG_AGCC
23._GC-01-078-4-14
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
24._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
25._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGG_AGCC
26._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
27._GU_154_/C
CCGGCGCCTTTTTTCCCCAAGGCCAGCC
28._GC-01-78-4-14
GGGGCGGGAAAAAA__AAGGGGAGGG
 1516171819202122232425262728
_Input profile
AAGGCCCCGGGGGGCCACCCGGCCAAGG
1._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
2._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
3._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
4._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
5._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
6._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
7._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
8._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
9._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
10._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
11._GU_154_/C
AAGGCCCCGGGGGGCCACCCGGCCAAGG
12._GU_154_/C
AAGGCCCCGGGGGGCCACCCGGCCAAGG
13._GU_154_/C
AAGGCCCCGGGGGGCCACCCGGCCAAGG
14._GU_154_/C
AAGGCCCCGGGGGGCCACCCGGCCAAGG
15._GU_154_/C
AAGGCCCCGGGGGGCCACCCGGCCAAGG
16._GU_154_/C
AAGGCCCCGGGGGGCCACCCGGCCAAGG
17._GU_154_/C
AAGGCCCCGGGGGGCCACCCGGCCAAGG
18._GU_154_/C
AAGGCCCCGGGGGGCCACCCGGCCAAGG
19._GU_154_/C
AAGGCCCCGGGGGGCCACCCGGCCAAGG
20._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
21._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
22._GC-01-078-4-14
AAGGCCCCGGGGGGCCACCCGGCCAAGG
23._GC-01-078-4-14
AAGGCCCCGGGG_CCACCCGGCCAAGG
24._GU_154_/C
AAGGCCCCGGGG_CCACCCGGCCAAGG
25._GU_154_/C
AAGGCCCCGGGGGGCCACCCGGCCAAGG
26._GU_154_/C
AAGGCCCCGGGGGGCCACCCGGCCAAGG
27._GU_154_/C
AAGGCCCCGGGGGGCCACCCGGCCAAGG
28._GC-01-78-4-14
AAGGGGGGCCCC_GGACCCCC_AA_
 2930313233343536373839   
_Input profile
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
1._GC-01-078-4-14
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
2._GC-01-078-4-14
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
3._GC-01-078-4-14
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
4._GC-01-078-4-14
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
5._GC-01-078-4-14
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
6._GC-01-078-4-14
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
7._GC-01-078-4-14
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
8._GC-01-078-4-14
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
9._GC-01-078-4-14
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
10._GC-01-078-4-14
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
11._GU_154_/C
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
12._GU_154_/C
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
13._GU_154_/C
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
14._GU_154_/C
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
15._GU_154_/C
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
16._GU_154_/C
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
17._GU_154_/C
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
18._GU_154_/C
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
19._GU_154_/C
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
20._GC-01-078-4-14
GG_CCGGCCAATTTTAAATGGX_XX_XX_X
21._GC-01-078-4-14
GGAACCGGCC_TTTTAAATGGX_XX_XX_X
22._GC-01-078-4-14
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
23._GC-01-078-4-14
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
24._GU_154_/C
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
25._GU_154_/C
GGAACCGGCCAATTTTAAATGGX_XX_XX_X
26._GU_154_/C
GGAACCGGCC_TTTTAAATGGX_XX_XX_X
27._GU_154_/C
GG_CCGGCCAATTTTAAATGGX_XX_XX_X
28._GC-01-78-4-14
GGAAGGGGGGAAAAAAAAATGGX_XX_XX_X

Input profile: GU_154_/C

 
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Mars Center for Cocoa Science, Brazil
Location: 1414 12 > F
 Dapeng Zhang, 2016

1._GU_154_/C GC-01-078-4-14

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 16
Notes: 16
 Mars, 2018

2._GU_154_/C GC-01-078-4-14

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15 > FP4
 Mars, 2018

3._GU_154_/C GC-01-078-4-14

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

4._GU_154_/C GC-01-078-4-14

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

5._GU_154_/C GC-01-078-4-14

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12 > FP3
 Mars, 2018

6._GU_154_/C GC-01-078-4-14

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10 > FP2
 Mars, 2018

7._GU_154_/C GC-01-078-4-14

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

8._GU_154_/C GC-01-078-4-14

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

9._GU_154_/C GC-01-078-4-14

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

10._GU_154_/C GC-01-078-4-14

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

11._GU_154_/C

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 15 > F
 Dapeng Zhang, 2016

12._GU_154_/C

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 2
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

13._GU_154_/C

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 3
 Dapeng Zhang, 2016

14._GU_154_/C

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 4
 Dapeng Zhang, 2016

15._GU_154_/C

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 9
 Dapeng Zhang, 2016

16._GU_154_/C

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 13
 Dapeng Zhang, 2016

17._GU_154_/C

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 14
 Dapeng Zhang, 2016

18._GU_154_/C

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 16
 Dapeng Zhang, 2016

19._GU_154_/C

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 10 > F
 Dapeng Zhang, 2016

20._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

21._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

22._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

23._GU_154_/C GC-01-078-4-14

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

24._GU_154_/C

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 5
 Dapeng Zhang, 2016

25._GU_154_/C

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 7
 Dapeng Zhang, 2016

26._GU_154_/C

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 8
 Dapeng Zhang, 2016

27._GU_154_/C

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 1414 1 > FP
 Dapeng Zhang, 2016

28._GU_154_/C GC-01-78-4-14

50 %
34 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 14, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1270 7TcSNP1253 8TcSNP1165 9TcSNP1144 10TcSNP1075
11TcSNP1062 12TcSNP1060 13TcSNP998 14TcSNP994 15TcSNP953
16TcSNP929 17TcSNP917 18TcSNP891 19TcSNP872 20TcSNP723
21TcSNP645 22TcSNP619 23TcSNP591 24TcSNP577 25TcSNP560
26TcSNP534 27TcSNP529 28TcSNP469 29TcSNP429 30TcSNP372
31TcSNP242 32TcSNP230 33TcSNP226 34TcSNP193 35TcSNP151
36TcSNP150 37TcSNP144 38TcSNP32 39TcSNP25